rs31133737 SNP Detail

Summary

• ID
  rs31133737
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52813495 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAACCTTTG TCCTTTTAAA
  AGATCCAAAA ATTACTTGAA GCCCAGTCAG GTGAATAAAA TCCGAGGTTT ACAGTACCTA
  CCTTGGGTAC AGATATCAAG GATGTTTGTG TTTGTTTGGC TTGTTTTATA CTTTTGAATG
  AGACAGACCT ATAGACTAAC AAAGCCTTTC TTCCTAGTGT GACAGAGATT GCCATCCCTA
  W
  AGCCTTTCCA GGGCCTGTGT AGGGCTCTTG TGAATTATCC ATCATGGCCC TTGCCAACCC
  TTGTGGAAGC AACATGCCTA ACAACTGTCT CCTTTAGTGT CTGGAACTCC ACAGGGCAGG
  GACCTTCCAT GCATTCTCGC TCTTCCTAAC CTGACACTGC GCTTTAACTT AGGAATAATA
  GCTTAGTCAA AATGTGCCTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45501242	mCV25212736	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	T
ss135179440	ENSMUSSNP6769470	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31133737					SNP	A	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52813495 () rs orientation: forward

Symbol	Name	Function Class
Gm20750	predicted gene, 20750	682 bp downstream
Rr576600	regulatory region 576600	1191 bp proximal
Rr576601	regulatory region 576601	1280 bp proximal