rs31130702 SNP Detail

Summary

• ID
  rs31130702
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:102181649 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGATGGTT AAGAGCAGCT
  TGAGCAGAGG GAGCTCAGCT TCCTCTGGCC CTGCTTGCTT CTCCCACCAT GGAACCTTCT
  GCTCTTCCAC CATGGTACTA GGTAGCAGGA GGCCTTCAGC AGAAGCTGAA CAGTCCCCAG
  CACCTTGCTC TTAGACTTCC CAGCCTCCAG AGCTGTGAAC TAAATCAGGT TTTATTCTTT
  R
  TGTATTATTG AGTCTCAGGT AATCTGGGAT TGTCACAGAA AACAGATCAC AACACCGTTC
  ATCTCTACAT TGCCTGCTGC CAGAGTTTTG TTAACCTGAC ACAACGGAAC CATACCTGGG
  AAGAGGGCAT CTCACCTGAG GAATTGTCTC CATTAGTGGG CTTGTAGGAA TGTCCGTGGG
  GTATTTTCTT GATTAATGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45501105	mCV25068826	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss135555685	ENSMUSSNP2312696	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
ss320855292	CHEV_3_102078256	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31130702					SNP	A	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:102181649 () rs orientation: forward

Symbol	Name	Function Class
A230001M10Rik	RIKEN cDNA A230001M10 gene	within coordinates
Gm65464	predicted gene, 65464	within coordinates
Rr582219	regulatory region 582219	921 bp proximal
Rr582220	regulatory region 582220	1401 bp proximal
Rr582221	regulatory region 582221	1656 bp proximal