rs31128911 SNP Detail

Summary

• ID
  rs31128911
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:144219849 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATGGTGTG ACACTTCTCA
  ACAGGTGTTC AGTGCCAACC ACATTCGCAG AGGCTGCAAT ACTGACATCA GTCTTACCTG
  GCTTTGGAAG CAGTGGTGAG GGAGAGAGAC CAGAAGTGCT CTTTCCTTTT CTGAGTAGCT
  TGTGGAACAC AGCTCTCGGC AGTAAATGCT TCATCATTTG GTCAAGTGGT ACTTCAGGGA
  M
  GTTTGGAACA AACTTGTTTC TGATCATTAA TTCCATGGCT TACACAGATA GCATAGCTTC
  CAGGGCAAGC AGATTTTTAA GAAATAAAGA AGGTAAGGCA AAGTGCTCCG TCAAGTCTAT
  ACTATATAAC TGGTGAAAGA AACTGAGAGA GAACAAGAGA CAAGCATTTC CTGCAACTAA
  ATCAATGGCG CATGACGTGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	NZW/LacJ	PWD/PhJ
ss47020094	NES10845984	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	NZW/LacJ	PWD/PhJ
rs31128911					SNP	A	A	A	A	A	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47020094	NES10845984	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:144219849 () rs orientation: forward

Symbol	Name	Function Class
Hs2st1	heparan sulfate 2-O-sulfotransferase 1	Intron
Rr586664	regulatory region 586664	484 bp distal