rs31105721 SNP Detail

Summary

• ID
  rs31105721
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138357144 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCATA GCAATAAGAC AGTGGGTCAC
  R
  GCTGGGAAGG CATGGCAGGG TTCCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45500050	mCV22920399	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	G
ss135955803	ENSMUSSNP3740587	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss320980847	CHEV_3_138314347	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31105721					SNP	G	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138357144 () rs orientation: forward

Symbol	Name	Function Class
Rr586176	regulatory region 586176	59 bp proximal
Rr586177	regulatory region 586177	415 bp proximal
Rr586178	regulatory region 586178	1379 bp proximal