rs31098671 SNP Detail

Summary

• ID
  rs31098671
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:67420767 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACCT GCTTCAGATT CCAGGAAGCC
  M
  GTCCTGGTTT CTCCATTCTC ACAGA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45499314	mCV27557758	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31098671					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:67420767 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13247	CpG island 13247	1267 bp proximal
Gm40067	predicted gene, 40067	1815 bp upstream
Rarres1	retinoic acid receptor responder (tazarotene induced) 1	Intron
Rr577934	regulatory region 577934	185 bp distal
Rr577935	regulatory region 577935	410 bp distal