rs31096742 SNP Detail

Summary

• ID
  rs31096742
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:10460786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTCACTGAA GCTTCGGGTA ATGTATGAGC TGAGTCACTA
  AAATGCCAAA GTACAACAAC AAAAATGTTT CTCTTTTTAA ACTATAAATG ATATCACTCC
  R
  AAAAGAAACA AAAGTACTTT GAAATGAATC CTAGTGCTGC CCCCTGTTGA CATTTTGGAG
  TGGTGCAAAC AAGGCAGACT ACCCGAAATC TAAGTGCTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45499194	mCV25007033	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss134582263	ENSMUSSNP907310	ENSEMBL	ENSEMBL_Sanger	f	SNP	G			A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31096742					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:10460786 () rs orientation: forward

Symbol	Name	Function Class
Gm66278	predicted gene, 66278	within coordinates
Rr573635	regulatory region 573635	within coordinates
Rr573636	regulatory region 573636	34 bp proximal