rs31092443 SNP Detail

Summary

• ID
  rs31092443
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:121759356 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTCCATGGA CAGTAGTTGG CTGTTTGGAT ATGGGTGGGA
  TGGTTAAAGT CGGATCTGCT GGAGAAAATG TTAAGAACCA CGTGGAGCCA GGCATGGTGG
  Y
  GCACGCCTTT AATCCCAGCA CTCGGGAGGC AGTGGCAGGA GGATTTCTGA GTTCGAGGCC
  AGCCTGGTCT ACAGAGTGAG TTCCAGGACA GCCAGGGCT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45497076	mCV25244512	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss135732799	ENSMUSSNP4237990	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T	C
ss320907363	CHEV_3_121668625	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31092443					SNP	T	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121759356 () rs orientation: forward

Symbol	Name	Function Class
Arhgap29	Rho GTPase activating protein 29	Intron
Rr584209	regulatory region 584209	1679 bp distal
Rr584210	regulatory region 584210	1199 bp distal
Rr584211	regulatory region 584211	1334 bp distal
Rr584212	regulatory region 584212	1623 bp proximal