rs31091940 SNP Detail

Summary

• ID
  rs31091940
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95872025 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTATTTTT TTTATTTTTC
  CTTTTTAATG TGTTTGGGTG TTTTGCCTAC GTGTTTGTCT GGAGAGGGCA TTGGATCCCC
  AGGGACTGGA GTTACAAATG GTTGTAAGCC ACTATGTGGC TACTGGCAGT CAAACCCAGG
  TCCTCGGTAA GAGCAGCCGC AGTGTTCTTA ATAGCCTAGC CACAGTGGGG TGGTGGTGGC
  R
  CATGCCTTTA ATCCTAGTAG CACTTGGGAG GCAAAGGCAG GGAGATCTCC GAGTTCAAGG
  CCAGCCTGGT CTACAGAGTG AGTTCCAGGA CAGCCAGAGC TACACAAGAA ACCTTGTCTC
  AGATGCCCCC CGCCAAAACA AAAACAAACA AACAAACAAA CAAACACCCC CAAAAAACCA
  AAAAAACAGT CATCTTTCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45496867	mCV27558391	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31091940					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95872025 () rs orientation: forward

Symbol	Name	Function Class
Gm20940	predicted gene, 20940	325 bp upstream
Rr581104	regulatory region 581104	749 bp distal
Rr581105	regulatory region 581105	823 bp distal
Rr581106	regulatory region 581106	452 bp proximal
Rr581107	regulatory region 581107	1284 bp proximal