rs31088452 SNP Detail

Summary

• ID
  rs31088452
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:104194600 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGAGAAGG AGCAGATGCC
  TGGGGGGCAG AACTAAAATC CAGTGCAAGG GCCCTAACGT GGGCCTTTGT TTGTTTGGAA
  AGCACTGAGA AGTCTTCATG GCTAAAGAGT AGCAGGAATT GAGGTCAGAG AAACTAAACA
  GGGTTTGGTG GCACAGAGGC CAAGGTAAGC CACTTGGTTT ATTCTGAACG TTAGGCAAAG
  M
  TACGATTGGA GAATGATACG ATTGGGTTTA TACTTTATAA GAAAGACTCA AGAGGTGAGG
  GTGGGCTGCC ACATGGAACC ATTTGGTAGA AAGGGCAAGG CAGAACCAGA GAGATGCTTC
  GGCCATGGTC CACGCTGAAA ATGGTGGTGG TAGCAAGATA AGAATTTCAA GAAATCACTG
  TGTAGACATA CAAGAAAAGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45497697	mCV24645032	ABI	CRAMUS_MOUSE	f	SNP	C	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31088452					SNP	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:104194600 () rs orientation: forward

Symbol	Name	Function Class
Rr582481	regulatory region 582481	807 bp proximal
Rr582482	regulatory region 582482	1788 bp proximal