rs31081084 SNP Detail

Summary

• ID
  rs31081084
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:27171618 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACATGGCT CACAGCCATC
  TTAACTCCAC TCCCACGGGG ATGTGTGTCC TCTGTCGGCC TCCGTGAGCA CTGTATGGAT
  GAGGCACACA GACATGGACA CTAAATAAAC ATCCATACAT AATGGGAAAA AGAAAGAACC
  CAAAATGCAC CATTGGTGAA AAAAAAGTAT TAAAATATAT GGTCCTGAAT AAAACTGGTC
  R
  TTTATGTTGG ATTTTGAAGA ATTATTAGTA AGTTTTGATG TGGGAATAAG ACAAGCTAAG
  GTGCTATTTT AAAGCATAGC CATGTAAAAG TTGTTTGACT TTTAAGAGAG GATATTCCTC
  AAGATGGTGT AACACTTTCA TTAGAAACCA TGAAGACATC AGTCTGCACC TAGGGAAGGA
  GCTGATGGGG AGCCACGTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45495455	mCV24689222	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss134702167	ENSMUSSNP2109480	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31081084					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:27171618 () rs orientation: forward

Symbol	Name	Function Class
Ect2	ect2 oncogene	Intron
Rr574348	regulatory region 574348	952 bp proximal