rs31075765 SNP Detail

Summary

• ID
  rs31075765
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:135209646 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTTATCAT AGAACCCAGG
  ACCAACAGCT CTGACCCATT TCCACCCACA ATGGGTTAGG CCTTCTCCCA CTAACCACTA
  AGAAATAATA AGAAAATGCC TTACAACCTA GTCTTATAGA GCTGTCTTCT CCATTGTGAC
  TCCTTCCTTC TTGTTTGTTT TATTTTTATT TATTTATTTG TTTGTTTATT TTTGGTTTTT
  W
  GAGACAGGGT TTCTCTCTGT AGTCATGGCT GTTCTGGAAC GCACTCTGTA GACCAGGCTG
  GTCTCAAACT CAGAAATCTG CCTGCCTCTG CCTCCCAAGT GCTGGGATTA AAGGCGTGCG
  CCACCACTGC CCGGATTGTT TTATTTTATT TTATTTTATT TATTTTTTTT AAGATTTATT
  TATTTATTTT ATGTAAGTAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45495397	mCV23957939	ABI	CRAMUS_MOUSE	f	SNP	T	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs31075765					SNP	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:135209646 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Manba	mannosidase, beta A, lysosomal			Intron
				Noncoding-Transcript-Variant
Rr585725	regulatory region 585725			820 bp distal
Rr585726	regulatory region 585726			1528 bp proximal
Rr585727	regulatory region 585727			1810 bp proximal
Rr585728	regulatory region 585728			1833 bp proximal