rs31067659 SNP Detail

Summary

• ID
  rs31067659
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:75204958 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCCCATT TTCAGGTTAT
  GTTGCCAGAA TTCTCACAAG GCTTCCTTTG TAGGAAAGAT GTTTGCACAG ATCTTACTTG
  TCAAATGCTC TCAAACTGCA CAGGCTAGAA TAGTCTGAAA AATAGAGCAC ACTTGTGCAC
  ATGTTCTTTC GAAATCCTCA GAGATCATTC ACTTGCATTT TTCAAGTTAA GCTTCCTTGT
  Y
  CTCTCTTATT AGCCCTGCAC TGCAGCTGGA GCCTCAGAGA CAATGCACTT TAAGTAGCCT
  CTATTTATAG AGTCATGGGA AGAACAGAGT CAGATTGCCA GAGACTCTCC TCTAAATCTT
  TAGAATCTCA TGATGTTTCT GTCTCTGGTA TCAGTTTTGA AAATGAAGGT CATTTAGGGA
  GGAGAAGTAT TCATCCATAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss47013944	NES10770861	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs31067659					SNP	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47013944	NES10770861	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:75204958 () rs orientation: forward

Symbol	Name	Function Class
Rr578335	regulatory region 578335	within coordinates
Wdr49	WD repeat domain 49	Intron