rs31060288 SNP Detail

Summary

• ID
  rs31060288
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:87470807 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGGC TGGTTTTTCA GACGTTTAGT
  Y
  CATTACTGTC ATGGCAGGAA ACATG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45495189	mCV24897529	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss135464152	ENSMUSSNP6585770	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss320834275	CHEV_3_87367422	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31060288					SNP	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87470807 () rs orientation: forward

Symbol	Name	Function Class
Rr579522	regulatory region 579522	686 bp distal
Rr579523	regulatory region 579523	920 bp distal
Rr579524	regulatory region 579524	1864 bp proximal