rs31051765 SNP Detail

Summary

• ID
  rs31051765
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:115922914 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTTA TAGCAAAGCT CTGTAGTACA
  S
  CAGAAGCTGT AGATGTGTGA AATAG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45493629	mCV23276036	ABI	CRAMUS_MOUSE	f	SNP	C	C	G
ss135669146	ENSMUSSNP6716868	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		G
ss320894370	CHEV_3_115832183	CHEVERUD	SCREENING_POP	f	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs31051765					SNP	C	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115922914 () rs orientation: forward

Symbol	Name	Function Class
D3Mit215	DNA segment, Chr 3, Massachusetts Institute of Technology 215	1191 bp proximal
Gm43109	predicted gene 43109	within coordinates
Rr583656	regulatory region 583656	1615 bp distal
Rr583657	regulatory region 583657	182 bp proximal
Tssr35297	transcription start site region 35297	110 bp downstream
Tssr35298	transcription start site region 35298	184 bp downstream
Tssr35299	transcription start site region 35299	350 bp downstream
Vcam1	vascular cell adhesion molecule 1	Intron