rs31048225 SNP Detail

Summary

• ID
  rs31048225
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16990745 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCACAACTT AATTCTTGTT
  TCTGTCACAA GTCCTCACTT TCCTCTCCCC TGGAATAAAC TGCTCACTTG CATGCAGTAA
  GCAATAATCT TTAAGGGCTT CTTGGACAAT GCCTTTCTTT GCTTTCTATA TCTGACACAT
  GGCTTCCAGG TAATTCTTCC CTAAGCACAG GCTGCACTTA GAAATGCACT CACTTACTTG
  Y
  TATTAACAAC AGAATGACTC TGACACTCTA GAGATCAGTC CGTGTCCCCT GCTCCCCTCC
  ATTTTATCTA ACCACATAAA CCATGCATTT CAAACAATCA CATTAAAGAG ATTTCGAGAT
  AGTCTGCATC CTACTTTGTG AGGTAAACCT TGCTTAAAGG CACCTTTCAA ATTCCTAGTA
  TCCTCTTTTT TAAAAAATTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45492775	mCV24700935	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss134647033	ENSMUSSNP2694427	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31048225					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16990745 () rs orientation: forward

Symbol	Name	Function Class
Rr573811	regulatory region 573811	1608 bp proximal