rs31044570 SNP Detail

Summary

• ID
  rs31044570
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:39869271 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGATTTTTT TGACATTGTA
  TAAAAACAAT AGGTTTTGGC TTACACACAC TTTCACATGT AAAGATCCCA CCCCGCCCAC
  GGCATACGGG CTTCTCTGTG TGGCACTGCC ATCTAGTGGC TAACTAACTA GTGGGTAGCC
  TGCTTTACTT TGAGCGAACA GTTATTGTTC CAGAAATATT TAATGAGCAT CTGCTATGTG
  Y
  AGCATACTTG TAACAAGCTC TGGGAGTCGT AAAATGATGG AAACTTAATT TCTGAGTGCA
  AAATTTTATT TGTTCTTTCC TATAGAATAA AAGCAGCATG GTAGAGAATC CCTTGCAACC
  TCCACTTGAA ACTGTGTAAA ATTATGAAGT TATGTACCCT GATGTTTAAA AAGTTTCTGG
  TAGAAAGTAT AAAAGCAAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45492827	mCV24783823	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss134854698	ENSMUSSNP237621	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31044570					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:39869271 () rs orientation: forward

Symbol	Name	Function Class
Rr575773	regulatory region 575773	within coordinates
Rr575774	regulatory region 575774	77 bp distal