rs31044362 SNP Detail

Summary

• ID
  rs31044362
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:152048583 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTAGGGGT AGACTCTAGG
  ACTTCACGCC AGGCAAGTTC TCTGCAACTG GGTTACATCC CTTGCTCAAT TGTAAGTGTT
  TATTTCATTT TTTAAGCTTT TGTGTGTATT GGTTATTTTT TTCTATTGTC ATGATGAAAG
  ACTGTAATCA AGGACTTATA AAAGAAAGAC TTTACTTGGG TGTTATGGTT GCAGATGTTC
  M
  AAGATGGCAG AGCACAGGTG GAGGCGACTG GAACGGTAGC TCAAGCTCAC ATGCTGAAGA
  GCAAGCAGCA AGTGGTGCAG TGCTAAGGGC TTGTGGCTTT TGGAACCTCT AAACCTATTC
  CAGGAAGCTC ACACCTTCTC AGTCTCCGCA GACAGCCACC CACGGCATCG AGTATTCAAA
  TGCCAAAGGC TTATGGGATA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45492432	mCV23507834	ABI	CRAMUS_MOUSE	f	SNP	C	C	A
ss136102533	ENSMUSSNP879625	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss321028689	CHEV_3_152005910	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31044362					SNP	C	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:152048583 () rs orientation: forward

Symbol	Name	Function Class
Rr587533	regulatory region 587533	11 bp proximal