rs31043721 SNP Detail

Summary

• ID
  rs31043721
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:144923934 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAACCCAATC TATCTATTGA
  GACTACCTCC CTCCAGCTTA AACAGTGGGA ATGTTCTTTG AGGCTTTGAG TGTTTCAAAT
  CATATTTTAA GAAAAATGTA AATCTCTCTC CTTTATTCAT CAAGAGTCTA CCAAACAGAC
  AGTCTCTATT TTGAATGTGT ATACTACACT CAGTATTTGA ACATTTACCT GCTCTTGTAC
  S
  ATAACTCATG ATCCACCTAA TTGATTTGGA AATATAAGTT CATGAACTCT GACCTGGGCC
  TCCTTCCACA TCCAGTTTGG CCAATTGGTA ACGGGAGGAT TCAGATTTAA CTGTTTGTTC
  ACTGAACAGC TCAGAGACAC TTCTGAGGAG AGGCCTTTGT GGACTTCCCG GGAGCTACCC
  CTCGTTGGGT CTGTTATACT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45492918	mCV23564146	ABI	CRAMUS_MOUSE	f	SNP		G					C		C
ss61094907	NES16604383	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G		G	C	C	C		G	G	C	G		G
ss136035804	ENSMUSSNP7181286	ENSEMBL	ENSEMBL_Sanger	f	SNP		G							C
ss321007362	CHEV_3_144881137	CHEVERUD	SCREENING_POP	f	SNP												C					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31043721					SNP	G	G	G	G	G	G	C	G	C	C	C	C	G	G	C	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61094907	NES16604383	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:144923934 () rs orientation: forward

Symbol	Name	Function Class
Rr586766	regulatory region 586766	1831 bp proximal