rs31043522 SNP Detail

Summary

• ID
  rs31043522
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95949330 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGCA AACCAAACAC AAACAAGCAG
  Y
  TAGCTGGGCA TGATAACCCC CATCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45492819	mCV22910009	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C	C
ss135513600	ENSMUSSNP2225643	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		C
ss320841390	CHEV_3_95845941	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31043522					SNP	T	T	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95949330 () rs orientation: forward

Symbol	Name	Function Class
D3Umi26	DNA segment, Chr 3, University of Michigan 26	866 bp proximal
Rr581123	regulatory region 581123	967 bp distal
Rr581124	regulatory region 581124	1174 bp proximal
Vps45	vacuolar protein sorting 45	Intron