rs31037869 SNP Detail

Summary

• ID
  rs31037869
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:104950399 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGT GGTAAGGAAA CAGGGTCATC
  Y
  GGATCCAGCA GCCCTGATAA GAACT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45492014	mCV23788843	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T
ss135572877	ENSMUSSNP2841725	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
ss320861365	CHEV_3_104846001	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31037869					SNP	C	C	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:104950399 () rs orientation: forward

Symbol	Name	Function Class
Cttnbp2nl	CTTNBP2 N-terminal like	Intron
Rr582654	regulatory region 582654	1525 bp distal
Rr582655	regulatory region 582655	866 bp proximal
Rr582656	regulatory region 582656	1006 bp proximal