rs31032813 SNP Detail

Summary

• ID
  rs31032813
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:156269775 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGAT AAATCTTGGC AATCCCCTTC
  S
  TAATGAGCAG TTTAATAAGT GTTAC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45490795	mCV22727416	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	G	C
ss136128477	ENSMUSSNP6804507	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	G		C
ss321033469	CHEV_3_156227102	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31032813					SNP	C	C	G	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:156269775 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13974	CpG island 13974	1504 bp distal
Negr1	neuronal growth regulator 1	Intron
Rr587961	regulatory region 587961	430 bp distal
Tssr32479	transcription start site region 32479	1942 bp downstream
Tssr32480	transcription start site region 32480	1448 bp downstream
Tssr32481	transcription start site region 32481	1342 bp downstream