rs31004895 SNP Detail

Summary

• ID
  rs31004895
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:57353323 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGTTGCCG TGAAGTTTGT
  TGAGTCCTAA CACCCCCCGC CCCCTTTCTC CATGTCCTTT TCTTTCAAAT GCTAGACAAA
  ACCTAAACAT TCTTTTTCTG ATTTGGAATT TCTTACTCCC TCCCTTCCTC CCTCCCTCCC
  TCTTTCCTTC CCTCCCTCCC TGCCACGTGG CTGCCTGCCA GTATCTGTGG AGGACCTCCA
  S
  ACCAGTAATT CAAATAGCAT GGCTTTTTTT TTCCCCCTCC TCCAGGCATC TAAAGAGACT
  GGCAGCATGC CTGCCCTGGG GTTTTATTTT AAACTCTAAT AAATTATTTT CTTGAGCTTC
  CATTTGAGTC CACTATTAAT TTACTAAGAA CCTCTGGAAG GGACCTTGAT TTTTCTGGTA
  TCATCTGGTG ACTACAAGGC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45488774	mCV24428268	ABI	CRAMUS_MOUSE	f	SNP	G	C	G	G
ss135201350	ENSMUSSNP6009685	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31004895					SNP	G	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57353323 () rs orientation: forward

Symbol	Name	Function Class
Rr577097	regulatory region 577097	within coordinates
Rr577098	regulatory region 577098	1974 bp proximal