rs31001648 SNP Detail

Summary

• ID
  rs31001648
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:69900498 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGCCCACACC AAGCCTCCTG CAGAATGGCA GACTGTCTAA AGGGCAGACT GACTAAAGCC
  CTTCAGCTTC CCTGAGGCAC CGCTGAACTG CTTTCCTAAT AAAATATGCC AAAGTCTTAA
  CTCTTCTGTT TGAAGCAAAC TCAAGTAGAG AATGCTAATT ATCCTGATTG AATGTCTTGT
  AGAAAGATTT CTGTCTGCTC TTCCCACAGT AAAATATGCC TATGTAATCG ACATTACTGA
  GAAGAACACA ATGCAGGCAT TCTGACTCAA GGTAACCTCA TTCTTCCACC TGAAAGAAGG
  S
  TAAGGTATCT TACAAACCTG GCATGAAAGA GCTCATTTGG AAGCATCGCC CACACAGAGA
  AAACCAACGT CAAAAGATAC AAACAGTTCC ACCTTCATAA AACCAAACTG CAGCCACTCT
  TGAGAGAAAC CACGTACTCA CTGAATCTTT TATAAAGACA TTAGAAAGTA TCTCCTTACT
  TTAAAAATCA CTTAAAGGTT TTAATTTTAT ACATTTATTT TAAAAATATG CACTCTCTGC
  CCAGAGTTCA AAGTGCATCA AGATGATCCC TGTCCCATTT TGTTCTCAGG AACAACCTCT
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45488533	mCV24534196	ABI	CRAMUS_MOUSE	f	SNP	G	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31001648					SNP	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:69900498 () rs orientation: forward

Symbol	Name	Function Class
Rr578250	regulatory region 578250	713 bp proximal