rs31001290 SNP Detail

Summary

• ID
  rs31001290
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:8493633 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTTGGATC AGCAACCATT
  CCCTACTGCT GCATTCTTCA ACAGGGACGC ATACTGTCCC AAACAACCAA CACCTGCTGA
  ACATTTACGA CAGTCTAGGC ACTGTGCTAA GGGCTGTAGA AGTCTTGCTT TACTTTTGAG
  TTTTTAAAAA ACTTTGACCA GCTAGTTATG ATTATTTCAA TTCTTGCACA AGGTACTGTG
  W
  ATTGTGATGT TTTCTGTGTG CATTCTGAAT AGAGGGATTT AGGCAAAAGT TAAAGGAAGT
  CTGGCAGTTA CATATGATCA TTTTAGCATA ATAAGTACAT AGGAGCCAAT TTCATTTGCA
  ATGTGGGCAA AGTTCAAGTT TGCTGCCAAC TGTGGGCTCC ATGCCATTTA ATAAACTTTC
  CTTATAATTG TATTCATAAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45986725	mCV24766083	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	T	T
ss132970225	ENSMUSSNP1762775	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31001290					SNP	A	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:8493633 () rs orientation: forward

Symbol	Name	Function Class
Gm45062	predicted gene 45062	Intron
Rr626407	regulatory region 626407	1678 bp proximal