rs30996184 SNP Detail

Summary

• ID
  rs30996184
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101269288 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGGGGCTG GTAAAGTTAA
  TAACCTCTCA CAAAGTCCAA GAAAAATTGA TAACATCTGA CATTTTCTAC TCCACCACTG
  TCTTAGTTAG GGTTCTGTTG CTGTGAAGAG ACACCATGAC TCTTATAAAA GACGTTTAAT
  TGGGGCTGGC TTACAGTTCA GAGGTTTAGT CCATTCTCAT CATGAAAGAA AGCATGGCAG
  Y
  GTGCAGGTAG ACATGGTGCT GGAGAGGTGA CTGAATTCTA AATCTTGGTC CCCAGGCAGC
  AGAAAATGAC TGAGACACAC TGGCTTGTCT TGAGCTTCTG AGACCTCGAA GTCTGCCCCC
  ACTGACACGC TTTCTCCAAC AAGGCCATAC CTCCTAATAG TGCCACTCCC TCTGAGCCCA
  TTGGAGCCAT TTTCTTTCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45487470	mCV23815585	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss135546799	ENSMUSSNP3832689	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss320851950	CHEV_3_101165895	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30996184					SNP	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101269288 () rs orientation: forward

Symbol	Name	Function Class
Rr582021	regulatory region 582021	513 bp proximal
Rr582022	regulatory region 582022	1571 bp proximal