rs30993583 SNP Detail

Summary

• ID
  rs30993583
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143853763 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTTCCCCA TCACCTAGAC
  TCAGCGCCAG AAGATTAACC CAAATCATCC ACAGCTTGCC AAATCGGTGT TCAAGGCTAG
  GTGAGGCAGT TGGTGGGTAT GTCTCTTGAC ATCTGGTCAT CACTACAATG ACTGACATCA
  CTACAATGAC TGACAGCAGG TGACCTTTGA AGCAAGCCCT GGTCCCTGCA AGCTCTTCTG
  K
  ATGCTTGATC TCTTCTCATT CCAGATTTTT GCCTCTTTGG GGTTCCACAG TTGATACGAT
  TGATGGAGAA TTAATTTTTA TCTCTTTAAC ATAGAAATCA TCCTGTAAAA TGAAGGCCAA
  CTTGACTTTC TCCAGTTTGC ATCTCCGGGA GCATCCTACT TCTTTTCTTG TCACTCACCC
  CACCACCGTT ACTGGAACAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45487143	mCV23567586	ABI	CRAMUS_MOUSE	f	SNP	T	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs30993583					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143853763 () rs orientation: forward

Symbol	Name	Function Class
Rr586587	regulatory region 586587	567 bp distal