rs30990113 SNP Detail

Summary

• ID
  rs30990113
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52813494 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAAACCTTT GTCCTTTTAA
  AAGATCCAAA AATTACTTGA AGCCCAGTCA GGTGAATAAA ATCCGAGGTT TACAGTACCT
  ACCTTGGGTA CAGATATCAA GGATGTTTGT GTTTGTTTGG CTTGTTTTAT ACTTTTGAAT
  GAGACAGACC TATAGACTAA CAAAGCCTTT CTTCCTAGTG TGACAGAGAT TGCCATCCCT
  R
  TAGCCTTTCC AGGGCCTGTG TAGGGCTCTT GTGAATTATC CATCATGGCC CTTGCCAACC
  CTTGTGGAAG CAACATGCCT AACAACTGTC TCCTTTAGTG TCTGGAACTC CACAGGGCAG
  GGACCTTCCA TGCATTCTCG CTCTTCCTAA CCTGACACTG CGCTTTAACT TAGGAATAAT
  AGCTTAGTCA AAATGTGCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45486063	mCV25212735	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss135179437	ENSMUSSNP1465365	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30990113					SNP	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52813494 () rs orientation: forward

Symbol	Name	Function Class
Gm20750	predicted gene, 20750	683 bp downstream
Rr576600	regulatory region 576600	1192 bp proximal
Rr576601	regulatory region 576601	1281 bp proximal