rs30988355 SNP Detail

Summary

• ID
  rs30988355
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:104194625 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAGAACTA AAATCCAGTG
  CAAGGGCCCT AACGTGGGCC TTTGTTTGTT TGGAAAGCAC TGAGAAGTCT TCATGGCTAA
  AGAGTAGCAG GAATTGAGGT CAGAGAAACT AAACAGGGTT TGGTGGCACA GAGGCCAAGG
  TAAGCCACTT GGTTTATTCT GAACGTTAGG CAAAGATACG ATTGGAGAAT GATACGATTG
  R
  GTTTATACTT TATAAGAAAG ACTCAAGAGG TGAGGGTGGG CTGCCACATG GAACCATTTG
  GTAGAAAGGG CAAGGCAGAA CCAGAGAGAT GCTTCGGCCA TGGTCCACGC TGAAAATGGT
  GGTGGTAGCA AGATAAGAAT TTCAAGAAAT CACTGTGTAG ACATACAAGA AAAGCTGTCC
  AGATACAGGA CGACCTGACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45486226	mCV24645023	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss135566932	ENSMUSSNP6103271	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30988355					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:104194625 () rs orientation: forward

Symbol	Name	Function Class
Rr582481	regulatory region 582481	782 bp proximal
Rr582482	regulatory region 582482	1763 bp proximal