rs30988341 SNP Detail

Summary

• ID
  rs30988341
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:115978262 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCTT GATCTCTCGC TAGTGGCCTA
  Y
  GGGAGTCCTT CAGGAGATCC CAGTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45984517	mCV25233931	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss133574411	ENSMUSSNP6991663	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
ss321917077	CHEV_6_115951319	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30988341					SNP	T	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115978262 () rs orientation: forward

Symbol	Name	Function Class
Gm53336	predicted gene, 53336	within coordinates
Rr637126	regulatory region 637126	752 bp proximal
Rr637127	regulatory region 637127	1226 bp proximal