rs30987599 SNP Detail

Summary

• ID
  rs30987599
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:90337315 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCTGTCC TGAAGAGCCA
  AGTCCTTTCA TTAACCAGCT TCCCAGTACA TTCAGACGTC TGGCTTGGCC TCGTGCCCAC
  CAAGACTAAA ATTCTTAGCT GCAACTCAGT CAGGTGGCTT TAATTAATGG AAAATGTGAC
  CATAGCGCAT GTCCTAGCTG GAGAAAAAAC AGCACAGAGA AGAGCTCCCT GGTTATTATG
  K
  GCGGGAGAGG GGATGAGTGT GACTGTTAAA GAGACTGAAA CTTGTCCCAA GCCTCACAAG
  ACAAACAGCA GATGGTCTGG GAATTCGGCA GGGAGGATAT GGGACCCAGC ACCGCCAAAG
  GGGCCAAGGG ACCTGGCTCA CTAATGTTGC TTCTCCAAGA ACAGACCACA CCCAGTTCTG
  TGGCTTTATT TTCTTCCTTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45984380	mCV23962506	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30987599					SNP	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:90337315 () rs orientation: forward

Symbol	Name	Function Class
Rr634185	regulatory region 634185	608 bp distal
Rr634186	regulatory region 634186	within coordinates
Uroc1	urocanase domain containing 1	Intron