rs30983045 SNP Detail

Summary

• ID
  rs30983045
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:69164702 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAATGATCT GTAGCTAAAT
  CAGAGGATGT GCTAAAGAAG CAACAGGACT TTAAACTTCT TTCACTATTC CACAAGGGGG
  CAGCAGTTAC CGTAGCCTAT GTTTCTTATG CCTGGCGTTC AGAGGAACTG CATTAAAGGT
  CTTATGAATA AAATGTATTC TATTTTTAAA ATTATTAAAT TAAAAGCAGA ACAATGCATT
  S
  ATGCAAAACA AGAGAAAGTA AACTGAAATT TATTATTACT AATATATATG TATATATGAG
  TACATATAAC ATGAATATAT ACATGTTAGT ATATATAAGT ATATTAGTAT TATTATGTAC
  TAACTAGTAT ATACTAACAT GTTATATACT AATAATATAT GCTTATATAT AAGTATATCA
  GTATAAATAT AACATCACAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47005166	NES10772389	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	C	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30983045					SNP	G	G	G	G	G	G	G	G	G	C	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47005166	NES10772389	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:69164702 () rs orientation: forward

Symbol	Name	Function Class
Gm40070	predicted gene, 40070	within coordinates
Rr397716	regulatory region 397716	within coordinates
Rr578151	regulatory region 578151	within coordinates
Rr578152	regulatory region 578152	114 bp distal