rs30982201 SNP Detail

Summary

• ID
  rs30982201
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:69164449 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAAGAAAG AGTGAACAGG
  AAATCTTGTC AGGAAACAAT CTCACTAGAA AGCCACACCG TATGGAGTTA GCCTGACTCC
  TCATGAACCT TTGGGTTACG AACTTCTGTG TAAAGCTCTT GCGTTCCTCT ACTAACCCCA
  CCACAGAATG ATGCTGTCTT TTGTGGCAAT ATTCTAACAA TGTATTTTGT CTGAATGACT
  R
  CACTAAGTAC TGGAGAACAC AGACCTTATC TACCTATCTT GTTTTCTACA GGACAATGAT
  CTGTAGCTAA ATCAGAGGAT GTGCTAAAGA AGCAACAGGA CTTTAAACTT CTTTCACTAT
  TCCACAAGGG GGCAGCAGTT ACCGTAGCCT ATGTTTCTTA TGCCTGGCGT TCAGAGGAAC
  TGCATTAAAG GTCTTATGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47005162	NES10772381	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30982201					SNP	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47005162	NES10772381	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:69164449 () rs orientation: forward

Symbol	Name	Function Class
Gm40070	predicted gene, 40070	within coordinates
Rr397716	regulatory region 397716	within coordinates
Rr578151	regulatory region 578151	within coordinates
Rr578152	regulatory region 578152	118 bp proximal