rs30977807 SNP Detail

Summary

• ID
  rs30977807
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:90048634 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGTGTGTG TGTGTGTGTG
  TGTGTGTGTG TTTTCTGGAT CATGTGATAA TTGACTCTCA AAATAGTGTT TCCTTATGTA
  TTTTACCAAA TATAAACAAC TGAGGCAACT GAATTATTTG AAATGTCATA GCAATCACAT
  GGTAAGAGTC ATGGAATGTG CCAGAGAGAT GGCTGAGCAG TTAAGTACTC TGCTCCACAG
  R
  AAACTCAAGG TGAATTACCA ACAACCACAC TGGGTGGTCC ACAAGTGCCT ATATGTCTAG
  CTTTAGAGTA CCTGACACTT CTGGTTTTCA TGAGCACATG AACTAAATTA CACACACATA
  CACACTGTTA AAACTTTAAA ATAAACACTT CTTATGATCT TAACAGCTAA CCCAGGTCAA
  ATGAGAGACA TCTCATAGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48002899	NES11895977	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30977807					SNP	G	G	G	G	G	G	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48002899	NES11895977	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:90048634 () rs orientation: forward

Symbol	Name	Function Class
Vmn1r49	vomeronasal 1, receptor 49	434 bp downstream