rs30965072 SNP Detail

Summary

• ID
  rs30965072
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108730881 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAATATTTTA TAAGATGTTA TAAAATATTT TTCTTATTCA
  TTTTATTATT TTATTTGTGT GTAGCTGTCT GTGTGTGTAC CTGAGGTGAC CAGAAGACGG
  W
  GTCAGGTGTG CTGGAGATGG GTTACAGGTG ACTGTGAACT GCCTGATGTG GGTGCTGGTA
  ACCTAATTGG GGACCTCTGA AAGAGCAGCA AGTATTCTT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46464129	mCV25369564	ABI	CRAMUS_MOUSE	f	SNP	A		A	T
ss133508809	ENSMUSSNP5089358	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30965072					SNP	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108730881 () rs orientation: forward

Symbol	Name	Function Class
Rr636193	regulatory region 636193	1182 bp distal
Rr636194	regulatory region 636194	within coordinates