rs30959696 SNP Detail

Summary

• ID
  rs30959696
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95949797 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTTT TTTTTAATAT CATGAGAGAA
  R
  TGAAGAATTT TAAACAGACT TGAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45484452	mCV22910032	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss135513616	ENSMUSSNP2600584	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A
ss320841394	CHEV_3_95846408	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30959696					SNP	G	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95949797 () rs orientation: forward

Symbol	Name	Function Class
D3Umi26	DNA segment, Chr 3, University of Michigan 26	399 bp proximal
Rr581123	regulatory region 581123	1434 bp distal
Rr581124	regulatory region 581124	707 bp proximal
Vps45	vacuolar protein sorting 45	Intron