rs30958615 SNP Detail

Summary

• ID
  rs30958615
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:57521681 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAACTGGCT GGACTCAAAG
  CATTTGTCCT TTTTATAAAC ATATCTAGTT GCCCAGATGA ATCTTATCTT TGCTCCATGC
  ATTGGAAACA AGACTTTACA AGCTTGCCTT TAGACTCTAA ACTGTATAAA TTCATGAGTG
  AGTGGCAGTG AGCACTCATG ATCAAGCAGG ATCACAGTAT CTGTTACCAA GTGATATATG
  Y
  CAAAGCAGTG CTCTTAAGAT ATAACTAAAA CAGAGCCAAG TTCCCTCCTG TGTAATCTTC
  ATAAACAGTA TTCAAAAAAT GCTTTTTTGT CAGGGCAATG AAGTGAAGGA ACGAATAATT
  ATTTCTATGT AAACACATAA CAATAGAAAA GTACAAATAA TATTAGGAAA AACTGTTGTT
  TTGAAATCTG GAGTGCTAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45983186	mCV25134878	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss133241525	ENSMUSSNP6088272	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30958615					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:57521681 () rs orientation: forward

Symbol	Name	Function Class
Gm45193	predicted gene 45193	within coordinates
Gm66279	predicted gene, 66279	within coordinates
Rr631144	regulatory region 631144	808 bp distal
Rr631145	regulatory region 631145	within coordinates