rs30955724 SNP Detail

Summary

• ID
  rs30955724
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:105022780 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTCTGAGA TAGGTATGAT
  TTTTGTTCTG AGAGATTAAG AGGCTGAGAT CTAGGTAGCT AGAGGAACTT GCCAGGATCC
  CATAGCTTGT GAGTATTAGA GCCATAACTC AAACTCTCTG ACTTAGAAGC ATCATACCTT
  GCAGCCTTGC CATCAGATCC TAGGTATACT CCCTTCACCA GAGCTGAGAA AAGGACTCCC
  Y
  GCCCAACTCA GCTAGGATTC CCTATGGCTC TGGCTCCTTC ACCAGCAAGT CTATCTATGG
  CATTTGATCT TCCTGAGTTT GAGAGTTACT CCTTTCCAGT GAGCAAAGGA ACTCTCAGAC
  CAGTAGGGAG AGGCTATCAG AAAAGGAAGA TGGGGAAAAG GCAGGGTAAG TGGATCTAAA
  GGAGTGCATG TAATGGAGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45483454	mCV23173438	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	C
ss135573390	ENSMUSSNP6555728	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
ss320861444	CHEV_3_104918382	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30955724					SNP	T	T	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:105022780 () rs orientation: forward

Symbol	Name	Function Class
Gm40118	predicted gene, 40118	within coordinates
Rr582673	regulatory region 582673	823 bp distal
Rr582674	regulatory region 582674	950 bp distal
Rr582675	regulatory region 582675	970 bp proximal