rs30952638 SNP Detail

Summary

• ID
  rs30952638
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:36853588 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAAC AAATCAACAA ACAAAACACT
  Y
  AGTAATCATG ATAAATAATA TTGAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45483913	mCV24318588	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss134790806	ENSMUSSNP4219210	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss320705356	CHEV_3_36698361	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs30952638					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:36853588 () rs orientation: forward

Symbol	Name	Function Class
Rr575399	regulatory region 575399	1983 bp distal
Rr575400	regulatory region 575400	744 bp distal