rs30952557 SNP Detail

Summary

• ID
  rs30952557
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:83728491 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGA GCAGTGTGAG AGCTTAGCAA
  R
  CTCACCACCT TGGATGCTAC CCTCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45981261	mCV22373500	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss133350013	ENSMUSSNP150400	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
ss321844747	CHEV_6_83701503	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30952557					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83728491 () rs orientation: forward

Symbol	Name	Function Class
Atp6v1b1	ATPase, H+ transporting, lysosomal V1 subunit B1	Intron
Gm66892	predicted gene, 66892	within coordinates
Rr632931	regulatory region 632931	760 bp distal
Rr632932	regulatory region 632932	1007 bp distal