rs30952077 SNP Detail

Summary

• ID
  rs30952077
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:90336721 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCATGGTC AGTTGACCAC
  ACTGCATATA GGCAGCACAG TATGACAAGA GCCTCTAGGA ATGCAGGCAG AACCATTCAT
  TCATGACAGG GAAAAGAAGA GGCCAAGATC TCATACAAAG GCACTTCTCA ATGACTTGAA
  GACCTCCCAT GAGACTCCCC CCCTTAAAAG TTCCACCACC TCCCACAAGC AAGCATCTAA
  Y
  ATCCAAACTC TAGGGGACTC ATTCTGATTG GCATTGGCCA TTCCTCTGCT GCTGGAAATA
  TTAACTCAGA TTCCTCAGAC AAGGTCTATT CAGCAGTATT CACCGATCTC TTTCAGTATT
  CCCTCTCCCA GAATCGAAGA AAAAACATAG GCTTTACAGA TGAAGAAACT GAGGCTCAGA
  GGGTTTGCCT CTGCTAAGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45981443	mCV23962493	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss133377481	ENSMUSSNP6310476	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30952077					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:90336721 () rs orientation: forward

Symbol	Name	Function Class
Rr634185	regulatory region 634185	14 bp distal
Rr634186	regulatory region 634186	200 bp proximal
Uroc1	urocanase domain containing 1	Intron