rs30951877 SNP Detail

Summary

• ID
  rs30951877
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:69664910 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGGGGATAG GAATTGGGGT TAAAAAACAA ACAAAGAAAC
  CAAAAACGTA CTTTTGTCTT TATGTGTTTT TCAGGTCAAA TCATATTAAA GGCACTCTGA
  R
  ACCTCTGCCA AAGGCAGGCA CTACTCTCTG AGGAACATTT ATTTTACCAC TATGGCACTT
  GTCACAGTGG CCTGGAAACC CCAGGTAGAT GCTAGGTAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss45483411	mCV24613269	ABI	CRAMUS_MOUSE	f	SNP		G
ss50978644	NES13928516	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	A	G	G	G	A		G	G	G
ss135271407	ENSMUSSNP5825022	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss320793828	CHEV_3_69561499	CHEVERUD	SCREENING_POP	f	SNP									G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs30951877					SNP	A	G	A	A	G	G	G	A	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50978644	NES13928516	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:69664910 () rs orientation: forward

Symbol	Name	Function Class
9530051E23Rik	RIKEN cDNA 9530051E23 gene	1204 bp downstream
Rr375162	regulatory region 375162	1238 bp downstream
Rr578224	regulatory region 578224	687 bp distal
Rr578225	regulatory region 578225	905 bp distal