rs30949356 SNP Detail

Summary

• ID
  rs30949356
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:107511472 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCTGCCCAC CCTAATTTTG GAGCACCTGT TAAAAATACA
  AATGCATTAG GTTAAGGCAT CTAGTTTTGA GAGCTATGGA GTAGAGCCCT CTTTTCCAGT
  R
  GCTTCTTACT TTCCATTTAC ACTCTTTCTA GCTTAGAGTC ATGATGTTAT TTGAAAGCTC
  TGATAACTGT AAATGAGTTG TAATCTCTGA CCCAGGCTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45980918	mCV23133326	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	A	G
ss133484759	ENSMUSSNP840883	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30949356					SNP	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:107511472 () rs orientation: forward

Symbol	Name	Function Class
Lrrn1	leucine rich repeat protein 1, neuronal	Intron
Rr636003	regulatory region 636003	within coordinates