rs30948403 SNP Detail

Summary

• ID
  rs30948403
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:6082383 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTTATCAT TAGGTTTGTT
  CTTCTCATTG TGCCCTGGAT TTCCTAGATA CTTTGAATTT CACATTTTTT TGATTGTTGT
  GTCAATATTT TCTATGGCAT CTTCTGCACC TGAGATTCTC TCTTCTATCT CTTGTGTTCT
  GTTGGTGATT CTTGCACCTA TGGCTCCTGT CTTCTTTCCT AGGTTTTATA TTTCCAGAGT
  Y
  GTCTCCCTTT GTGATTTCTT TATTGTTTTC ACTTCCATTT TTAGATCCTG GATGGTTTTG
  TTCAATTCCT TCATTTCTTT GGATGTTTTC TCCTATATTT CTTTAAGGGA GTTTTTTTTT
  TTTTATGTCC TTCTTATAAT CTTCCATCAT CATCATGAGA AGTAACTTTA GATCCATATC
  TTGCTTTTCT GGTGTGATAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45482576	mCV25456654	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30948403					SNP	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:6082383 () rs orientation: forward

Symbol	Name	Function Class
Rr573206	regulatory region 573206	1503 bp proximal