rs30947584 SNP Detail

Summary

• ID
  rs30947584
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:27174123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCTC CTGCCTTCAG GTTCCTGCCC
  Y
  GAGTTCTTTT GATGATGAAC AATGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	LG/J	SM/J
ss45481564	mCV24689248	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss320688922	CHEV_3_27018896	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	LG/J	SM/J
rs30947584					SNP	T	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss134702191	ENSMUSSNP3758070	ENSEMBL	ENSEMBL_Sanger	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:27174123 () rs orientation: forward

Symbol	Name	Function Class
Ect2	ect2 oncogene	Intron
Rr574348	regulatory region 574348	1532 bp distal