rs30943960 SNP Detail

Summary

• ID
  rs30943960
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:57520631 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTGTTCAC CTTAGAAAAA
  TATCCAAAAT GGATGTATCT GGAGGATATC ATCCTTAGTG AGGTAACCCA ATCACAAAAG
  AACACACATG ATAAGCACTC AATGATAAGT GGATATTAAC CCAGAAACTT AGAATACCCA
  AGATACAATT TGCAAAACAC ATGAAACTCA AGAAGAAGGA AGACAAAAGT GTGGATACTT
  M
  ATTTCTTCTT AGAATGGGGA ACAAAATACC CATGGAAGGA GTTACAGAGA CAAAGTTCAG
  AGCAGAGCCT GGCAGAATGA CTATTCAGAG ACTGCCCCAC TTGGAGAACC ACCCCATAAA
  CAACCACCAA ACCCAGACAC TAGGCAGATG CCAATAAGAG CCTGCTGACA GGAGCCTGAT
  ATAGCTGTCC CCTGCAAGGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45980393	mCV25134782	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30943960					SNP	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:57520631 () rs orientation: forward

Symbol	Name	Function Class
Gm45193	predicted gene 45193	within coordinates
Gm66279	predicted gene, 66279	within coordinates
Rr379418	regulatory region 379418	1322 bp downstream
Rr631144	regulatory region 631144	17 bp proximal
Rr631145	regulatory region 631145	998 bp proximal