rs30943425 SNP Detail

Summary

• ID
  rs30943425
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:44151840 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCAACTGTGA GATGAACCTA AATTATTCTC TCTGGTTTCC
  AATTTCAATC TGGCTCTCCT AGGAGCAGAT TTTAGTAGAC AGGAGTTGCC ACCAGGAAAT
  R
  GGATTTGGAG ACTCCCTCTG TGTGTGTGTG TGTGTGTGTA CAAAACAATA GAAAGGGAAA
  GGGGCTTAAT GCTGTGACAA ACCAAATGGA AAGAAACACA                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ
ss47500279	NES11464980	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ
rs30943425					SNP	A	A	A	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47500279	NES11464980	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:44151840 () rs orientation: forward

Symbol	Name	Function Class
Gm35629	predicted gene, 35629	455 bp downstream
Gm64845	predicted gene, 64845	1942 bp downstream
Tssr81144	transcription start site region 81144	686 bp downstream