rs30943317 SNP Detail

Summary

• ID
  rs30943317
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:88847179 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTAA CTCCAGTCCC AGGTATCTAC
  K
  CCCTCTTCAG GCCTCCAGTG GCAAT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45481164	mCV23077038	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	T
ss135473081	ENSMUSSNP5102249	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		T
ss320836364	CHEV_3_88743794	CHEVERUD	SCREENING_POP	f	SNP					G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30943317					SNP	G	G	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:88847179 () rs orientation: forward

Symbol	Name	Function Class
Dap3	death associated protein 3	Intron
Rr579925	regulatory region 579925	618 bp distal
Rr579926	regulatory region 579926	within coordinates
Rr579927	regulatory region 579927	within coordinates
Rr579928	regulatory region 579928	99 bp proximal