rs30943036 SNP Detail

Summary

• ID
  rs30943036
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:39273668 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGTAGCTGTC TCTTGTGAGA CTATGCCGGG GCCTAGCAAA CACAGAAGTG GATGCTCACA
  GTCAGCTAAT GGATGGATCA CAGGGCTCCC AATGGAGGAG CTAGAGAAAG TACCCAAGGA
  GCTAAAGGGA TCTTCAACCC TATAGGTGGA ACAACATTAT GAACTAACCA GTACCCCTGA
  GCTCTTGACT CTAGCTGCAT ATGTATCAAA AGATGGCCTA GTCGGCCATC ACTGGAAAGA
  GAGGCCCATT GGACACGCAG ACTTTGTGTG CCCCGGTACA GGGGAACGCC AGGGCCAAAG
  K
  GGGGGAGTGG GTGGGTAGGG GAGTGGGGGT GGGTGGGTAA GGGGGACTTT TGGTATAGCA
  TTGGAAATGT AAATGAGCTA AATACCTAAT AAAAAATGGA AAAAAAAATA TCCAGAAAAA
  AAAAAGAAAG AAAGAAAGAA AGAAAGAAAG AAAGAAAGAA AGAAAGAAAG AAAGAAAGAA
  AGAAAGAAAG AAAGAACCTC CTAAGTCCAA GGAAAATTAT CCAGAGCCGT CTGGGGTGGT
  GGTGCGCTTT GTTGTTTACA AAGAAGAGCC TTTCACACCT AATATGTGAT TTTCTTACTG
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45480860	mCV24355747	ABI	CRAMUS_MOUSE	f	SNP	T	G	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30943036					SNP	T	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:39273668 () rs orientation: forward

Symbol	Name	Function Class
Gm43008	predicted gene 43008	1673 bp upstream
Rr575743	regulatory region 575743	330 bp proximal
Rr575744	regulatory region 575744	1382 bp proximal