rs30942726 SNP Detail

Summary

• ID
  rs30942726
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121458512 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAAGAGAT TCAAGAATTT
  TATGAGGTAC TATATGAGTC TATTTTATAG CTGTATATTA GCAGTGGATA ATCAAAAATG
  AAACTAAGAT AATTTCTAAT CATGGAGCTA GAGAGATGGT TCAAAGCTAA TAAGCACTCA
  CTGCTCTTGC AAAGGACCCA AGTTCTCTCC CTTGAGCCCT CATCAGACTG TTCTAGACCC
  S
  ATGTAACTCC AGTTTCAGGG ACCTTGATAT CTTCTGGCCC CCGAGGGGAC CTGCACACAC
  AGCACATCAG AACTCAGGTA GACGTACATA TATACACATA TTTTTTTAAA AAGAAGTCAT
  TAGCAATGAC ATCAAATATC ATGAAATGCT TAGAAATAAA TTTTGCTAAA GACGTGTAAG
  GCTTGTGCAC ACCAAAAATT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45482046	mCV23895175	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	C	C
ss135726076	ENSMUSSNP3625	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30942726					SNP	G	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121458512 () rs orientation: forward

Symbol	Name	Function Class
Rr584141	regulatory region 584141	1454 bp distal