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rs30942726 SNP Detail
Summary
  • ID
    rs30942726
  • Variation Type
    SNP
  • Alleles
    C/G
Genome Location and Flanking Sequence
  • Location
    Chr3:121458512 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                AAAAAGAGAT TCAAGAATTT
    TATGAGGTAC TATATGAGTC TATTTTATAG CTGTATATTA GCAGTGGATA ATCAAAAATG
    AAACTAAGAT AATTTCTAAT CATGGAGCTA GAGAGATGGT TCAAAGCTAA TAAGCACTCA
    CTGCTCTTGC AAAGGACCCA AGTTCTCTCC CTTGAGCCCT CATCAGACTG TTCTAGACCC
    S
    ATGTAACTCC AGTTTCAGGG ACCTTGATAT CTTCTGGCCC CCGAGGGGAC CTGCACACAC
    AGCACATCAG AACTCAGGTA GACGTACATA TATACACATA TTTTTTTAAA AAGAAGTCAT
    TAGCAATGAC ATCAAATATC ATGAAATGCT TAGAAATAAA TTTTGCTAAA GACGTGTAAG
    GCTTGTGCAC ACCAAAAATT                                            
    
    S = C/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
129X1/SvJ
A/J
C57BL/6J
DBA/2J
ss45482046 mCV23895175 ABI CRAMUS_MOUSE f SNP G G C C C
ss135726076 ENSMUSSNP3625 ENSEMBL ENSEMBL_Sanger f SNP G C C
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
129X1/SvJ
A/J
C57BL/6J
DBA/2J
rs30942726 SNP G G C C C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:121458512 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr584141 regulatory region 584141 1454 bp distal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory