rs30941308 SNP Detail

Summary

• ID
  rs30941308
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:17487080 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTATTTTAA AAACATAGGT
  AACTCGTCAG AATGTAAAAA CAAAATAAAG ATTATTCTGA AGCTTCTTTC ACAAGAGAAA
  ACCTAAAAGC CATGCACACT CAATACTGCA CTACTGGGTC AGCTTGGATG CAAATGAGTT
  ATAAGATTGC TTGGCCTTCC CTTAGGGAGT CAGCATTCAT TTATTTACCT TCAGTTTTTT
  K
  GAGAAAAATA TAAAGATTGT GTTCTCATTC CTGGAAGATA TACTGATGTG TGTCGTGTTA
  AGAAACAATT TTTCATAAAA TGTACTCTGG ACTGATATGA CAATTTGTCT CCTATCCTTA
  TTTTTTATTC CCTCTTGTTT CCCTCACCAG CATCAAAAAA AAAAAAAATT CTAGTATATT
  TCTGAACAAT GAGAAGTACA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45979899	mCV23976288	ABI	CRAMUS_MOUSE	f	SNP		T	G				G		G
ss47812494	NES11721657	PERLEGEN	MM_PANEL2	f	SNP	T		G	G	G	G		G	G	G	T	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30941308					SNP	T	T	G	G	G	G	G	G	G	G	T	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47812494	NES11721657	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17487080 () rs orientation: forward

Symbol	Name	Function Class
Met	met proto-oncogene	Intron
Rr626803	regulatory region 626803	1432 bp proximal